A first glance on the enhancement of digital cell activity videos from glioblastoma cells with nuclear staining

Saul Calderon; Daniel Moya; Juan Carlos Cruz; Juan Manuel Valverde

doi:10.1109/CONCAPAN.2016.7942344

A first glance on the enhancement of digital cell activity videos from glioblastoma cells with nuclear staining

Saul Calderon, Daniel Moya, Juan Carlos Cruz, Juan Manuel Valverde

Producción científica: Capítulo del libro/informe/acta de congreso › Contribución a la conferencia › revisión exhaustiva

6 Citas (Scopus)

Resumen

In this work we explore a set of image enhancement techniques for improving contrast and removing noise from digital images of cell activity. The cells studied were extracted from cancerous brain tissue and exposed to different chemo-therapeutic agents, as microbiologists aim to analyze the behavior of cells exposed to different chemo-therapies. To ease and improve the precision of such analysis, an automatic cell tracking framework is of great interest. Thus, in this work we focus on the first stage of such framework, which refers to image preprocessing, aiming to noise removal and contrast enhancement, in order to improve cell segmentation and tracking performance. We compared the segmentation precision using different image preprocessing techniques based on the Deceived Weighting Average Framework (DeWAFF), reaching improvements of around 15 percent of segmentation accuracy, over no preprocessed images.

Idioma original	Inglés
Título de la publicación alojada	2016 IEEE 36th Central American and Panama Convention, CONCAPAN 2016
Editorial	Institute of Electrical and Electronics Engineers Inc.
ISBN (versión digital)	9781467395786
DOI	https://doi.org/10.1109/CONCAPAN.2016.7942344
Estado	Publicada - 2 jul 2016
Evento	36th IEEE Central American and Panama Convention, CONCAPAN 2016 - San Jose, Costa Rica Duración: 9 nov 2016 → 11 nov 2016

Serie de la publicación

Nombre	2016 IEEE 36th Central American and Panama Convention, CONCAPAN 2016

Conferencia

Conferencia	36th IEEE Central American and Panama Convention, CONCAPAN 2016
País/Territorio	Costa Rica
Ciudad	San Jose
Período	9/11/16 → 11/11/16

ODS de las Naciones Unidas

Este resultado contribuye a los siguientes Objetivos de Desarrollo Sostenible

Acceder al documento

10.1109/CONCAPAN.2016.7942344

Otros archivos y enlaces

Enlace a la publicación en Scopus

Citar esto

Calderon, S., Moya, D., Cruz, J. C., & Valverde, J. M. (2016). A first glance on the enhancement of digital cell activity videos from glioblastoma cells with nuclear staining. En 2016 IEEE 36th Central American and Panama Convention, CONCAPAN 2016 Artículo 7942344 (2016 IEEE 36th Central American and Panama Convention, CONCAPAN 2016). Institute of Electrical and Electronics Engineers Inc.. https://doi.org/10.1109/CONCAPAN.2016.7942344

Calderon, Saul ; Moya, Daniel ; Cruz, Juan Carlos et al. / A first glance on the enhancement of digital cell activity videos from glioblastoma cells with nuclear staining. 2016 IEEE 36th Central American and Panama Convention, CONCAPAN 2016. Institute of Electrical and Electronics Engineers Inc., 2016. (2016 IEEE 36th Central American and Panama Convention, CONCAPAN 2016).

@inproceedings{ab269fdc3d254d9e88fd6a157c14d78c,

title = "A first glance on the enhancement of digital cell activity videos from glioblastoma cells with nuclear staining",

abstract = "In this work we explore a set of image enhancement techniques for improving contrast and removing noise from digital images of cell activity. The cells studied were extracted from cancerous brain tissue and exposed to different chemo-therapeutic agents, as microbiologists aim to analyze the behavior of cells exposed to different chemo-therapies. To ease and improve the precision of such analysis, an automatic cell tracking framework is of great interest. Thus, in this work we focus on the first stage of such framework, which refers to image preprocessing, aiming to noise removal and contrast enhancement, in order to improve cell segmentation and tracking performance. We compared the segmentation precision using different image preprocessing techniques based on the Deceived Weighting Average Framework (DeWAFF), reaching improvements of around 15 percent of segmentation accuracy, over no preprocessed images.",

keywords = "Biomedical Imaging, Contrast enhancement, Digital Image processing, Fluorescence based microscopy, Noise removal, Non lineal image filters",

author = "Saul Calderon and Daniel Moya and Cruz, {Juan Carlos} and Valverde, {Juan Manuel}",

note = "Publisher Copyright: {\textcopyright} 2016 IEEE.; 36th IEEE Central American and Panama Convention, CONCAPAN 2016 ; Conference date: 09-11-2016 Through 11-11-2016",

year = "2016",

month = jul,

day = "2",

doi = "10.1109/CONCAPAN.2016.7942344",

language = "Ingl{\'e}s",

series = "2016 IEEE 36th Central American and Panama Convention, CONCAPAN 2016",

publisher = "Institute of Electrical and Electronics Engineers Inc.",

booktitle = "2016 IEEE 36th Central American and Panama Convention, CONCAPAN 2016",

}

Calderon, S, Moya, D, Cruz, JC & Valverde, JM 2016, A first glance on the enhancement of digital cell activity videos from glioblastoma cells with nuclear staining. En 2016 IEEE 36th Central American and Panama Convention, CONCAPAN 2016., 7942344, 2016 IEEE 36th Central American and Panama Convention, CONCAPAN 2016, Institute of Electrical and Electronics Engineers Inc., 36th IEEE Central American and Panama Convention, CONCAPAN 2016, San Jose, Costa Rica, 9/11/16. https://doi.org/10.1109/CONCAPAN.2016.7942344

A first glance on the enhancement of digital cell activity videos from glioblastoma cells with nuclear staining. / Calderon, Saul; Moya, Daniel; Cruz, Juan Carlos et al.
2016 IEEE 36th Central American and Panama Convention, CONCAPAN 2016. Institute of Electrical and Electronics Engineers Inc., 2016. 7942344 (2016 IEEE 36th Central American and Panama Convention, CONCAPAN 2016).

Producción científica: Capítulo del libro/informe/acta de congreso › Contribución a la conferencia › revisión exhaustiva

TY - GEN

T1 - A first glance on the enhancement of digital cell activity videos from glioblastoma cells with nuclear staining

AU - Calderon, Saul

AU - Moya, Daniel

AU - Cruz, Juan Carlos

AU - Valverde, Juan Manuel

PY - 2016/7/2

Y1 - 2016/7/2

N2 - In this work we explore a set of image enhancement techniques for improving contrast and removing noise from digital images of cell activity. The cells studied were extracted from cancerous brain tissue and exposed to different chemo-therapeutic agents, as microbiologists aim to analyze the behavior of cells exposed to different chemo-therapies. To ease and improve the precision of such analysis, an automatic cell tracking framework is of great interest. Thus, in this work we focus on the first stage of such framework, which refers to image preprocessing, aiming to noise removal and contrast enhancement, in order to improve cell segmentation and tracking performance. We compared the segmentation precision using different image preprocessing techniques based on the Deceived Weighting Average Framework (DeWAFF), reaching improvements of around 15 percent of segmentation accuracy, over no preprocessed images.

AB - In this work we explore a set of image enhancement techniques for improving contrast and removing noise from digital images of cell activity. The cells studied were extracted from cancerous brain tissue and exposed to different chemo-therapeutic agents, as microbiologists aim to analyze the behavior of cells exposed to different chemo-therapies. To ease and improve the precision of such analysis, an automatic cell tracking framework is of great interest. Thus, in this work we focus on the first stage of such framework, which refers to image preprocessing, aiming to noise removal and contrast enhancement, in order to improve cell segmentation and tracking performance. We compared the segmentation precision using different image preprocessing techniques based on the Deceived Weighting Average Framework (DeWAFF), reaching improvements of around 15 percent of segmentation accuracy, over no preprocessed images.

KW - Biomedical Imaging

KW - Contrast enhancement

KW - Digital Image processing

KW - Fluorescence based microscopy

KW - Noise removal

KW - Non lineal image filters

UR - http://www.scopus.com/inward/record.url?scp=85021415326&partnerID=8YFLogxK

U2 - 10.1109/CONCAPAN.2016.7942344

DO - 10.1109/CONCAPAN.2016.7942344

M3 - Contribución a la conferencia

AN - SCOPUS:85021415326

T3 - 2016 IEEE 36th Central American and Panama Convention, CONCAPAN 2016

BT - 2016 IEEE 36th Central American and Panama Convention, CONCAPAN 2016

PB - Institute of Electrical and Electronics Engineers Inc.

T2 - 36th IEEE Central American and Panama Convention, CONCAPAN 2016

Y2 - 9 November 2016 through 11 November 2016

ER -

Calderon S, Moya D, Cruz JC, Valverde JM. A first glance on the enhancement of digital cell activity videos from glioblastoma cells with nuclear staining. En 2016 IEEE 36th Central American and Panama Convention, CONCAPAN 2016. Institute of Electrical and Electronics Engineers Inc. 2016. 7942344. (2016 IEEE 36th Central American and Panama Convention, CONCAPAN 2016). doi: 10.1109/CONCAPAN.2016.7942344

A first glance on the enhancement of digital cell activity videos from glioblastoma cells with nuclear staining

Resumen

Serie de la publicación

Conferencia

ODS de las Naciones Unidas

Acceder al documento

Otros archivos y enlaces

Huella

Citar esto